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Plafker, Scott M.

Scott M. Plafker, Ph.D., R.Ph.

Scott M. Plafker, Ph.D., R.Ph.

Associate Member
Aging & Metabolism Research Program

Lab website:

My laboratory studies age-related macular degeneration (AMD), the leading cause of vision loss among the elderly in the US and other western countries. This complex disease is characterized by death of the light-sensing photoreceptors cells in the macula region near the center of the retina. As a consequence, patients progressively lose their central vision. Clinical and animal studies indicate that oxidative stress is a root cause of AMD. In the simplest terms, oxidative stress occurs when cells accumulate reactive oxygen species (ROS). These ROS are derivatives of the oxygen we breathe, and they can damage the building blocks of cells (e.g. proteins, DNA, and lipids). They are the reason that anti-oxidants such as vitamins C and E protect our cells from harm. Unfortunately, the cells of the eye are exquisitely sensitive to damage by ROS, and are constantly subjected to ROS derived from excessive sunlight exposure and cigarette smoke, major risk factors for AMD.

It is believed that photoreceptors in the macula die as a secondary consequence of chronic oxidative stress in neighboring cells called retinal pigment epithelial (RPE) cells. One can think of RPE cells as the guardians or caretakers of photoreceptors. These cells form a single layer that makes direct physical contact with photoreceptors and they function to provide nutrients, such as vitamin A, to the photoreceptors.

Our research program focuses on two main areas. One focus is to understand how chronic oxidative stress debilitates the mitochondria in RPE cells. Mitochondria are the energy-producing machines in our cells and AMD patients suffer a loss of functional mitochondria from their RPE cells. But, exactly how this happens and its ramifications on the capacity of these cells to care for photoreceptors are unknown. Our other focus is to identify strategies that increase the capacity of RPE cells to block the damage caused by oxidative stress. Together, these efforts have the potential to advance the development of therapeutics to prevent and treat AMD.

B.S., Rutgers University College of Pharmacy, Piscataway, NJ, 1992
Ph.D., Johns Hopkins University, School of Medicine, Baltimore, MD, 1998
Postdoc, University of Virginia, Center for Cell Signaling, Charlottesville, VA, 1998

Honors & Awards
2009 Young Investigator Travel Award, American Diabetes Association 69th Annual Meeting, New Orleans, LA
2008  Travel Fellowship, XVIIIth International Congress of Eye Research, Beijing, China
2008 Travel Fellowship, XIIIth International Symposium on Retinal Degenerations, Emeishan China
2004 Oklahoma Center for the Advancement of Science and Technology New Scientist Award
2002-2003 American Cancer Society Postdoctoral Fellowship
2000-2001  Postdoctoral Individual National Research Service Award – National Institutes of Health
1992  Rutgers University, College of Pharmacy Analytical Chemistry Award
1992 Rutgers University, College of Pharmacy Student Research Award

American Association for the Advancement of Science
American Diabetes Association
American Society of Cell Biology
Association for Research in Vision and Ophthamology
International Congress of Eye Research

Joined OMRF Scientific Staff in 2011

Age-related macular degeneration (AMD) is the leading cause of irreversible vision loss in people over 60 years of age. The pathogenesis of this disease is multifactorial and appears to involve a combination of environmental, metabolic, and genetic inputs. A mounting body of clinical and experimental evidence supports the idea that chronic oxidative stress in the retinal pigment epithelium (RPE) is a precipitating event in photoreceptor death and AMD onset. Yet, clinical studies have shown that high dose, oral anti-oxidant therapy only moderately slows the progression of advanced macular degeneration. The disconnect between these observations and outcomes highlights a growing consensus that free radicals can have both essential and deleterious consequences for cellular health. We are clearly only beginning to understand the fundamental roles of free radicals and oxidative stress in the context of AMD onset and progression. This knowledge gap is arguably a primary barrier to developing targeted interventions.

The research in our laboratory focuses on understanding (1) how RPE cells are affected by chronic oxidative stress and (2) the endogenous mechanisms these cells use to mitigate oxidative damage. We are currently pursuing studies to elucidate the consequences of oxidative stress on the integrity and function of the mitochondrial network in RPE cells. In complementary studies, we are continuing our efforts to determine how the ubiquitin proteolytic system protects against the accumulation of oxidatively-damaged biomolecules and contributes to regulating the anti-oxidant capacity of RPE cells. Specifically, we are studying a ubiquitin conjugating enzyme, called UbcM2, and the mechanisms by which this enzyme regulates the stability and function of Nrf2, the master anti-oxidant transcription factor in the RPE.

We are using a variety of experimental approaches including:  (i) genetic, chemical, and environmental mouse models of oxidative stress-induced retinopathy, (ii) cell culture and reconstitution assays to dissect the molecular mechanism(s) by which UbcM2 regulates Nrf2, and (iii) live-cell video microscopy to track changes in mitochondrial dynamics in response to oxidative stress. Our overarching goal is to apply the knowledge gained from this work to the development of vision-sparing therapeutics.

Recent Publications

* De Souza PC, Smith N, Atolagbe O, Ziegler J, Njoku C, Lerner M, Ehrenshaft M, Mason RP, Meek B, Plafker SM, Saunders D, Mamedova N, Towner RA. OKN-007 decreases free radicals levels in a preclinical F98 rat glioma model. Free Radic Biol Med 2015. [Abstract] EPub

Plafker KS, Plafker SM. The ubiquitin conjugating enzyme, UBE2E3 and its import receptor, Importin-11 regulate the localization and activity of the anti-oxidant transcription factor NRF2. Mol Biol Cell 2015. [Abstract] EPub

Nguyen L, Plafker KS, Starnes A, Cook MJ, Klevit RE, Plafker SM. The Ubiquitin conjugating enzyme, UBCM2, is restricted to monoubiquitylation by a two-fold mechanism that involves backside residues of the E2 and LYS-48 of ubiquitin. Biochemistry 53:4004-4014, 2014. [Abstract]

Selected Publications

Mirza S, Plafker KS, Aston C, Plafker SM. Expression and distribution of the class III ubiquitin-conjugating enzymes in the retina. Mol Vis 16:2425-2437, 2010. Abstract

Plafker SM. Oxidative stress and the ubiquitin proteolytic system in age-related macular degeneration. Adv Exp Med Biol 664:447-456, 2010. Abstract

Plafker KS, Nguyen L, Barneche M, Mirza S, Crawford D, Plafker SM. The ubiquitin-conjugating enzyme UbcM2 can regulate the stability and activity of the antioxidant transcription factor Nrf2. J Biol Chem 285:23064-23074, 2010. Abstract

Plafker KS, Singer JD, Plafker SM. The ubiquitin conjugating enzyme, UbcM2, engages in novel interactions with components of cullin-3 based E3 ligases. Biochemistry 48:3527-3537, 2009. Abstract

Plafker KS, Farjo KM, Wiechmann AF, Plafker SM. The human ubiquitin conjugating enzyme, UBE2E3, is required for proliferation of retinal pigment epithelial cells. Invest Ophthalmol Vis Sci 49:5611-5618, 2008. Abstract

Pick E, Lau OS, Tsuge T, Menon S, Tong Y, Dohmae N, Plafker SM, Deng XW, Wei N. Mammalian DET1 regulates Cul4A activity and forms stable complexes with E2 ubiquitin-conjugating enzymes. Mol Cell Biol 27:4708-4719, 2007. Abstract

View all publications in PubMed

Aging & Metabolism Research Program, MS 21
Oklahoma Medical Research Foundation
825 N.E. 13th Street
Oklahoma City, OK 73104

Phone: (405) 271-1735, (405) 271-1745
Fax: (405) 271-1437

Dan Pulliam, Ph.D.
Postdoctoral Fellow

Kendra Plafker
Laboratory Manager

Shruti Desai
Research Assistant

Mandy Lambros
Graduate Student

Chelsea Larabee
Graduate Student

Gary O’Mealey
Graduate Student