- Predictive Modeling of SLE progression in distinct immune cell types
- Single-cell RNA-Seq analysis of T cells, including V(D)J usage
- Pathway analysis of differentially expressed genes (including Ingenuity, KEGG, GSVA, GSEA, and Genomatix)
- Microbiome characterization
- Metagenomics and epigenomics in Lupus (including ATAC-Seq and CHiP-Seq)
- Characterization on novel immune cell subpopulations by low-input RNA-Seq
- Mutation profiling of cancerous cells
- Characterization of sensitivity and specificity of diagnostic tools
- Alternative splicing
- Genome assembly
